BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006G06SP1|AL425585
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1712 0.0
>3x_Contig1806
Length = 53694
Score = 1712 bits (861), Expect = 0.0
Identities = 880/888 (99%), Gaps = 2/888 (0%)
Strand = Plus / Plus
Query: 1 aagtcgactacattartactgtcaattcagtaaattcgcagttgcaggactttggtatag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5825 aagtcgactacattagtactgtcaattcagtaaattcgcagttgcaggactttggtatag 5884
Query: 61 gatccactattggtagtgccaatcctatcagcgggtcgtcaactccgttaggtggtgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5885 gatccactattggtagtgccaatcctatcagcgggtcgtcaactccgttaggtggtgtac 5944
Query: 121 cgcaaatacacaggtcagtttcwatgatggatactttgggaatacaaagaactcaatctc 180
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5945 cgcaaatacacaggtcagtttctctgatggatactttgggaatacaaagaactcaatctc 6004
Query: 181 cattccataacgctcctgggaatgattctccaagcattttttctcagcagacttctattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6005 cattccataacgctcctgggaatgattctccaagcattttttctcagcagacttctattc 6064
Query: 241 attggaacatgaattccgggatcaatactggcggtggggagataccgttcaacgctgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6065 attggaacatgaattccgggatcaatactggcggtggggagataccgttcaacgctgctg 6124
Query: 301 ggcctggaaatgggatggcagcagggaccgggactggtgatattcatactccaatatccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6125 ggcctggaaatgggatggcagcagggaccgggactggtgatattcatactccaatatccc 6184
Query: 361 gtccacctggcattattacgaacgtgcagcaaacttcgtggcagtacttggaccattcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6185 gtccacctggcattattacgaacgtgcagcaaacttcgtggcagtacttggaccattcaa 6244
Query: 421 atcaagttcaagggcctttcgattctgaaataatggatcaatggtataatgctgggtttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6245 atcaagttcaagggcctttcgattctgaaataatggatcaatggtataatgctgggtttt 6304
Query: 481 tcaacgaatctttgcatttaatgcctatgaatagtgatgatccctttcatttttctggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6305 tcaacgaatctttgcatttaatgcctatgaatagtgatgatccctttcatttttctggtc 6364
Query: 541 gctttatcatgttcaatgatttattatcaaagaccgggatcatcaatccattccatgcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6365 gctttatcatgttcaatgatttattatcaaagaccgggatcatcaatccattccatgcgt 6424
Query: 601 ttgatatgatttgtttcaaccatgcactcgcttctgctgctgcgccatcaaataatatga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6425 ttgatatgatttgtttcaaccatgcactcgcttctgctgctgcgccatcaaataatatga 6484
Query: 661 tgaactttggccaaaaggcggcagtagcacttccctgatgcagcagcatgtattgggcca 720
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 6485 tgaactttggccaaaag--gggagtagcacttccctgatgcagcagcatgtattgggcca 6542
Query: 721 atcgcaggcccatcctgccaatctgtctcaaagamaacccaagccattcgatcttcctgc 780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6543 atcgcaggcccatcctgccaatctgtctcaaagacaacccaagccattcgatcttcctgc 6602
Query: 781 atctaatactacgataagctcttcgtccactactccagtgccagtattacagaatatgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6603 atctaatactacgataagctcttcgtccactactccagtgccagtattacagaatatgat 6662
Query: 841 atctaaagggttgcacttcgacaataatacctatgcsaatattgacag 888
|||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6663 atctaaagggttgcacttcgacaataatacctatgcgaatattgacag 6710
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5431
Number of Sequences: 1807
Number of extensions: 5431
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)